C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539476 PITPNA-201 ENSG00000174238 9606 - 17:1517993-1562791 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLiverLungOvaryENST00000539476
Transcript ID Adipose Adrenal Brain Heart Kidney Liver Lung Ovary
ENST00000539476 6.711±0.00 7.449±0.00 25.169±0.00 5.323±0.00 7.142±5.65 4.423±0.00 12.554±0.00 11.908±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AE CIL_0006AE_0002 CGP 17:1494571-1562816
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143219 Pitpna-001 protein_coding Mus_musculus 0 2298
ENSMUST00000179521 Pitpna-202 protein_coding Mus_musculus 0 2265
ENSMUST00000179445 Pitpna-201 protein_coding Mus_musculus 0 1840
ENSMUST00000102509 Pitpna-002 nonsense_mediated_decay Mus_musculus 0 926
ENSMUST00000140841 Pitpna-003 retained_intron Mus_musculus 0 516
ENSMUST00000153768 Pitpna-004 processed_transcript Mus_musculus 0 307

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