C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutL homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539477 MLH1-202 ENSG00000076242 9606 + 3:36993777-37050842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000539477
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000539477 1.005±0.00 3.103±0.00 1.278±0.00 2.869±0.00 1.478±0.00 2.422±0.00 1.973±0.00 1.810±0.00 1.935±0.00 1.361±0.00 3.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041G CIL_00041G_0002 CGP 3:36993332-37183689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 IBA synaptonemal complex
GO:0003697 IDA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005712 IBA chiasma
GO:0006200 IBA ATP catabolic process
GO:0006298 IGI:IEA mismatch repair
GO:0016020 IDA membrane
GO:0016446 IBA somatic hypermutation of immunoglobulin genes
GO:0016887 IBA ATPase activity
GO:0030983 IEA mismatched DNA binding
GO:0032389 IBA MutLalpha complex
GO:0032407 IDA MutSalpha complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035079 Mlh1-001 protein_coding Mus_musculus 0 1860
ENSMUST00000135218 Mlh1-002 retained_intron Mus_musculus 0 1384
ENSMUST00000123869 Mlh1-003 retained_intron Mus_musculus 0 1351
ENSMUST00000135695 Mlh1-006 nonsense_mediated_decay Mus_musculus 0 477
ENSMUST00000134316 Mlh1-005 processed_transcript Mus_musculus 0 444
ENSMUST00000128795 Mlh1-004 retained_intron Mus_musculus 0 215

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