C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MNAT CDK-activating kinase assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539616 MNAT1-002 ENSG00000020426 9606 + 14:60734776-60968678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000539616
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000539616 5.721±0.00 5.844±0.00 1.883±0.00 3.730±0.03 5.873±0.00 3.958±1.50 2.038±0.34 5.585±0.00 2.530±0.00 5.496±0.00 4.821±0.50 11.439±1.24 3.506±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MW CIL_0008MW_0001 VISTA 14:60353481-60955733
CIL_0006SL CIL_0006SL_0002 CGP 14:60709528-60969953
CIL_0006SK CIL_0006SK_0002 CGP 14:60734742-60981358

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 TAS regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000718 TAS nucleotide-excision repair, DNA damage removal
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005675 IDA holo TFIIH complex
GO:0005737 IDA cytoplasm
GO:0006200 IDA ATP catabolic process
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0006461 TAS protein complex assembly
GO:0006468 IDA protein phosphorylation
GO:0007049 IEA cell cycle
GO:0008094 IDA DNA-dependent ATPase activity
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0008353 IDA RNA polymerase II carboxy-terminal domain kinase activity
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0047485 IPI protein N-terminus binding
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021523 Mnat1-001 protein_coding Mus_musculus 0 675
ENSMUST00000187549 Mnat1-002 protein_coding Mus_musculus 0 675
ENSMUST00000189644 Mnat1-003 nonsense_mediated_decay Mus_musculus 0 333
ENSDART00000006648 mnat1-001 protein_coding Danio_rerio 2e-40 171

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