C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | high mobility group AT-hook 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000539662  |
HMGA2-012 |
ENSG00000149948 |
9606 | + |
12:65828001-65963410  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088X | CIL_00088X_0001 | VISTA | 12:65441147-66043028 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000785 | IEA | chromatin |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000072777
|
Hmga2-001 | protein_coding | Mus_musculus | 0 | 239 |
|
ENSMUST00000159699
|
Hmga2-002 | protein_coding | Mus_musculus | 0 | 206 |
|
ENSMUST00000159310
|
Hmga2-003 | retained_intron | Mus_musculus | 5e-28 | 128 |
