C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539716 POP5-003 ENSG00000167272 9606 - 12:120580596-120581398 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryTestisENST00000539716
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary Testis
ENST00000539716 1.530±0.00 0.591±0.00 0.965±0.00 2.244±0.00 1.403±0.00 1.302±0.00 4.300±0.00 1.731±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841
CIL_00075W CIL_00075W_0002 CGP 12:120533480-120581398

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135455 Pop5-002 nonsense_mediated_decay Mus_musculus 6e-34 148
ENSMUST00000081497 Pop5-001 protein_coding Mus_musculus 6e-34 148

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