C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539826 ARHGAP5-001 ENSG00000100852 9606 + 14:32076985-32155083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000539826
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000539826 7.618±0.00 6.821±0.00 10.083±0.00 6.806±0.00 6.363±0.00 3.135±0.00 7.785±7.10 10.416±0.00 2.496±0.71 22.515±0.00 1.703±0.58 6.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RC CIL_0005RC_0002 CGP 14:31489956-32159728
CIL_0000H7 CIL_0000H7_0001 CGP 14:32076114-32837681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005100 TAS Rho GTPase activator activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006184 TAS GTP catabolic process
GO:0007155 TAS cell adhesion
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0007266 TAS Rho protein signal transduction
GO:0016020 IEA membrane
GO:0032321 TAS positive regulation of Rho GTPase activity
GO:0042169 IPI SH2 domain binding
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110725 Arhgap5-201 protein_coding Mus_musculus 0 7020
ENSMUST00000181965 Gm26528-001 processed_pseudogene Mus_musculus 0 300

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