C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cleavage and polyadenylation specific factor 3-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000540437  |
CPSF3L-201 |
ENSG00000127054 |
9606 | - |
1:1311585-1324687  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00059X | CIL_00059X_0002 | CGP | 1:1292376-1311677 |
| CIL_0001ML | CIL_0001ML_0002 | CGP | 1:1311585-1328897 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0016180 | IDA | snRNA processing |
| GO:0016787 | IEA | hydrolase activity |
| GO:0032039 | IDA | integrator complex |
| GO:0072562 | IDA | blood microparticle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030901
|
Cpsf3l-001 | protein_coding | Mus_musculus | 0 | 2017 |
|
ENSMUST00000120794
|
Cpsf3l-004 | protein_coding | Mus_musculus | 0 | 1432 |
|
ENSMUST00000134678
|
Cpsf3l-005 | processed_transcript | Mus_musculus | 0 | 861 |
|
ENSMUST00000156460
|
Cpsf3l-003 | nonsense_mediated_decay | Mus_musculus | 0 | 737 |
