C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage and polyadenylation specific factor 3-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120794 Cpsf3l-004 ENSMUSG00000029034 10090 + 4:155869546-155888685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120794
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120794 7.966±0.00 11.066±0.00 7.661±0.54 7.158±0.00 2.355±0.63 4.505±0.31 5.883±0.90 5.094±0.24 2.484±0.50 8.773±0.83 7.628±4.56 4.395±1.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323275 CPSF3L-004 retained_intron Homo_sapiens 0 1432
ENST00000411962 CPSF3L-011 protein_coding Homo_sapiens 0 1432
ENST00000419704 CPSF3L-009 protein_coding Homo_sapiens 0 1432
ENST00000421495 CPSF3L-007 protein_coding Homo_sapiens 0 1118
ENST00000434694 CPSF3L-017 protein_coding Homo_sapiens 0 457
ENST00000435064 CPSF3L-001 protein_coding Homo_sapiens 0 1432
ENST00000450926 CPSF3L-023 protein_coding Homo_sapiens 0 1941
ENST00000458452 CPSF3L-012 nonsense_mediated_decay Homo_sapiens 0 1432
ENST00000462432 CPSF3L-005 processed_transcript Homo_sapiens 0 1064
ENST00000467408 CPSF3L-019 retained_intron Homo_sapiens 0 560
ENST00000470030 CPSF3L-008 retained_intron Homo_sapiens 0 558
ENST00000478641 CPSF3L-006 retained_intron Homo_sapiens 0 346
ENST00000527098 CPSF3L-024 nonsense_mediated_decay Homo_sapiens 0 1432
ENST00000527383 CPSF3L-043 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000528879 CPSF3L-046 nonsense_mediated_decay Homo_sapiens 0 881
ENST00000531292 CPSF3L-044 retained_intron Homo_sapiens 0 484
ENST00000531377 CPSF3L-042 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000532772 CPSF3L-029 nonsense_mediated_decay Homo_sapiens 0 1330
ENST00000540437 CPSF3L-201 protein_coding Homo_sapiens 0 1432
ENST00000545578 CPSF3L-202 protein_coding Homo_sapiens 0 1432
ENST00000618806 CPSF3L-203 protein_coding Homo_sapiens 0 549
ENST00000620829 CPSF3L-204 protein_coding Homo_sapiens 0 1432

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