C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540749 KRT17P8-001 ENSG00000256937 9606 + 12:9127783-9128645 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartLiverLungOvaryTestisENST00000540749
Transcript ID Adrenal Bladder Breast Colon Heart Liver Lung Ovary Testis
ENST00000540749 0.287±0.00 0.338±0.00 0.036±0.00 0.269±0.00 0.059±0.00 3.734±2.61 0.284±0.00 0.062±0.00 0.122±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656
CIL_0000TB CIL_0000TB_0009 CGP 12:9067664-9208370

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 359
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 303
ENSMUST00000188261 RP24-79D2.1-001 processed_pseudogene Mus_musculus 0.000004 57

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