C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126460 Krt19-002 ENSMUSG00000020911 10090 - 11:100140907-100143699 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126460
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126460 131.017±35.42 0.543±0.07 71.303±23.06 1010.140±60.45 1.117±0.00 1.811±0.40 1.290±0.93 25.407±0.00 0.501±0.00 46.452±23.71 315.363±264.90 1.295±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0017 CGP 11:100131758-100148665
CIL_0000TN CIL_0000TN_0006 CGP 11:100140810-100193246

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000167586 KRT14-001 protein_coding Homo_sapiens 0 405
ENST00000246635 KRT13-001 protein_coding Homo_sapiens 0 433
ENST00000251646 KRT33B-001 protein_coding Homo_sapiens 0 198
ENST00000254043 KRT15-001 protein_coding Homo_sapiens 0 398
ENST00000300992 KRT17P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 409
ENST00000301653 KRT16-001 protein_coding Homo_sapiens 0 339
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 0 444
ENST00000326333 KRT17P2-002 processed_transcript Homo_sapiens 0 291
ENST00000332088 KRT17P5-001 transcribed_unprocessed_pseudogene Homo_sapiens 3e-22 110
ENST00000336861 KRT13-002 protein_coding Homo_sapiens 0 433
ENST00000361566 KRT19-001 protein_coding Homo_sapiens 0 819
ENST00000393974 KRT15-004 protein_coding Homo_sapiens 0 361
ENST00000393976 KRT15-007 protein_coding Homo_sapiens 0 398
ENST00000398469 KRT42P-002 processed_transcript Homo_sapiens 0.000000002 69
ENST00000399124 KRT16P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 259
ENST00000399211 KRT17P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 418
ENST00000405746 KRT19P1-001 processed_pseudogene Homo_sapiens 0 647
ENST00000414673 KRT16P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 265
ENST00000417510 KRT16P6-002 processed_transcript Homo_sapiens 0 222
ENST00000420566 KRT17P3-001 unprocessed_pseudogene Homo_sapiens 0 405
ENST00000425692 KRT16P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 329
ENST00000438131 KRT42P-001 processed_transcript Homo_sapiens 0.000000002 69
ENST00000439127 KRT16P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 5e-27 126
ENST00000441550 KRT14-002 retained_intron Homo_sapiens 7e-20 102
ENST00000443208 KRT19P4-001 processed_pseudogene Homo_sapiens 0 377
ENST00000444070 KRT17P5-003 processed_transcript Homo_sapiens 1e-21 110
ENST00000445433 KRT17P5-002 processed_transcript Homo_sapiens 9e-22 110
ENST00000451704 KRT17P7-001 transcribed_unprocessed_pseudogene Homo_sapiens 4e-22 110
ENST00000453795 KRT17P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 246
ENST00000455635 KRT19-002 protein_coding Homo_sapiens 0 348
ENST00000458290 KRT15-006 protein_coding Homo_sapiens 0 278
ENST00000458343 KRT42P-003 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000000004 69
ENST00000463128 KRT17-002 protein_coding Homo_sapiens 0 337
ENST00000463447 KRT15-005 retained_intron Homo_sapiens 0 255
ENST00000464634 KRT13-006 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000468313 KRT13-003 retained_intron Homo_sapiens 0 433
ENST00000468880 KRT19-005 retained_intron Homo_sapiens 0 440
ENST00000470004 KRT15-003 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000474031 KRT15-008 retained_intron Homo_sapiens 0 361
ENST00000476662 KRT14-003 retained_intron Homo_sapiens 0 348
ENST00000479031 KRT19-004 retained_intron Homo_sapiens 0 268
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 0 279
ENST00000497016 KRT15-002 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000507547 KRT19P3-001 processed_pseudogene Homo_sapiens 0 536
ENST00000510337 KRT18P16-001 processed_pseudogene Homo_sapiens 0.0000000008 69
ENST00000540235 KRT17-201 protein_coding Homo_sapiens 0 444
ENST00000540749 KRT17P8-001 processed_pseudogene Homo_sapiens 0 303
ENST00000570596 KRT33B-001 protein_coding Homo_sapiens 0 198
ENST00000577449 KRT17P1-005 retained_intron Homo_sapiens 0 235
ENST00000577750 KRT16P1-005 retained_intron Homo_sapiens 0.000000000000001 88
ENST00000577817 KRT17-005 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000579062 KRT16P2-002 processed_transcript Homo_sapiens 9e-36 154
ENST00000579679 KRT17P5-006 processed_transcript Homo_sapiens 2e-22 110
ENST00000579946 KRT17P4-002 retained_intron Homo_sapiens 1e-21 110
ENST00000580621 KRT16P3-002 retained_intron Homo_sapiens 7e-17 94
ENST00000581013 KRT17P6-002 processed_transcript Homo_sapiens 0 226
ENST00000581027 KRT16P1-003 processed_transcript Homo_sapiens 0 202
ENST00000581146 KRT17P2-004 retained_intron Homo_sapiens 4.00001e-41 172
ENST00000582047 KRT17P1-004 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000582224 KRT17P1-002 retained_intron Homo_sapiens 0 255
ENST00000582261 KRT17P7-002 processed_transcript Homo_sapiens 9e-22 110
ENST00000583364 KRT17P7-003 processed_transcript Homo_sapiens 2e-22 110
ENST00000583748 KRT16P6-003 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000584135 KRT16P1-004 processed_transcript Homo_sapiens 9e-36 154
ENST00000584481 KRT16P6-004 processed_transcript Homo_sapiens 6e-29 132
ENST00000584759 KRT16P3-003 retained_intron Homo_sapiens 3e-17 94
ENST00000584769 KRT17P2-003 processed_transcript Homo_sapiens 0 333
ENST00000584962 KRT16P1-002 retained_intron Homo_sapiens 0 202
ENST00000587544 KRT13-005 protein_coding Homo_sapiens 0 433
ENST00000590038 KRT17-006 protein_coding Homo_sapiens 0 294
ENST00000590425 KRT13-007 protein_coding Homo_sapiens 0 243
ENST00000593067 KRT16-003 protein_coding Homo_sapiens 0 289
ENST00000593096 KRT19-007 protein_coding Homo_sapiens 0 682
ENST00000620421 KRT33B-201 protein_coding Homo_sapiens 0 198

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