C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pre-mRNA processing factor 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541371 PRPF19-003 ENSG00000110107 9606 - 11:60898541-60906569 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungMuscleOvaryENST00000541371
Transcript ID Brain Breast Lung Muscle Ovary
ENST00000541371 6.932±0.00 2.752±0.00 3.181±0.00 1.964±0.00 3.703±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025642 Prpf19-001 protein_coding Mus_musculus 0 1007
ENSMUST00000163185 Gm7701-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000178868 Prpf19-003 processed_transcript Mus_musculus 0 610
ENSMUST00000179297 Prpf19-002 protein_coding Mus_musculus 0 610
ENSMUST00000190275 Prpf19-006 retained_intron Mus_musculus 0 568
ENSMUST00000187751 Prpf19-005 retained_intron Mus_musculus 0 392
ENSMUST00000191092 Prpf19-008 retained_intron Mus_musculus 0 327

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