C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 3, type 1, P-cadherin (placental)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542274 CDH3-003 ENSG00000062038 9606 + 16:68645301-68698692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000542274
Transcript ID Adipose Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000542274 0.063±0.00 0.314±0.00 2.033±0.00 0.180±0.00 1.262±0.00 0.149±0.00 12.742±5.43 7.804±0.00 1.226±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y9 CIL_0004Y9_0003 CGP 16:68636189-68835548

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080797 Cdh3-201 protein_coding Mus_musculus 0 2135

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