C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: methyltransferase like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543235 METTL3-006 ENSG00000165819 9606 - 14:21498173-21511310 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENST00000543235
Transcript ID Brain Liver Muscle
ENST00000543235 5.340±0.00 3.055±0.00 2.496±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074
CIL_0005QL CIL_0005QL_0001 CGP 14:21459020-21499175
CIL_0002HL CIL_0002HL_0001 CGP 14:21476597-21511375
CIL_0002HK CIL_0002HK_0001 CGP 14:21498133-21537216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0016422 IEA mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity
GO:0080009 IEA mRNA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022767 Mettl3-001 protein_coding Mus_musculus 0 935
ENSMUST00000147768 Mettl3-002 nonsense_mediated_decay Mus_musculus 0 929
ENSMUST00000122962 Mettl3-004 nonsense_mediated_decay Mus_musculus 0 905
ENSMUST00000156611 Mettl3-005 retained_intron Mus_musculus 0 750
ENSMUST00000153539 Mettl3-003 nonsense_mediated_decay Mus_musculus 0 747
ENSMUST00000174351 Mettl3-012 nonsense_mediated_decay Mus_musculus 0 699
ENSMUST00000173896 Mettl3-014 nonsense_mediated_decay Mus_musculus 0 689
ENSMUST00000127797 Mettl3-006 retained_intron Mus_musculus 0 560
ENSMUST00000174853 Mettl3-009 protein_coding Mus_musculus 0 501
ENSMUST00000173138 Mettl3-015 nonsense_mediated_decay Mus_musculus 0 472
ENSMUST00000173546 Mettl3-010 retained_intron Mus_musculus 0 368
ENSMUST00000174360 Mettl3-013 protein_coding Mus_musculus 0 366
ENSMUST00000022766 Tox4-001 protein_coding Mus_musculus 0 215
ENSMUST00000145875 Mettl3-007 nonsense_mediated_decay Mus_musculus 0 195
ENSMUST00000173656 Mettl3-011 protein_coding Mus_musculus 0 191
ENSMUST00000130550 Mettl3-008 retained_intron Mus_musculus 2.00386e-43 182

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