C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyltransferase like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022767 Mettl3-001 ENSMUSG00000022160 10090 - 14:52294841-52305128 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000022767
Transcript ID Adipose Bladder Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000022767 11.235±0.00 12.012±0.78 7.647±0.00 5.004±0.00 8.058±0.27 12.840±3.28 12.068±0.13 14.951±0.00 12.532±0.35 5.258±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0002 VISTA 14:52247406-52849170
CIL_0005QL CIL_0005QL_0002 CGP 14:52261759-52296391
CIL_0002HL CIL_0002HL_0002 CGP 14:52279146-52305128
CIL_0002HK CIL_0002HK_0002 CGP 14:52294668-52328762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 ISS RNA methylation
GO:0001734 ISO mRNA (N6-adenosine)-methyltransferase activity
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006397 IMP mRNA processing
GO:0007623 IMP circadian rhythm
GO:0016422 ISS mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity
GO:0016556 ISO mRNA modification
GO:0016607 ISS nuclear speck
GO:0019827 IMP stem cell maintenance
GO:0036396 ISS MIS complex
GO:0061157 IMP mRNA destabilization
GO:0080009 IMP mRNA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298717 METTL3-001 protein_coding Homo_sapiens 0 2383
ENST00000367606 METTL3-014 processed_transcript Homo_sapiens 0 209
ENST00000377543 METTL3-016 protein_coding Homo_sapiens 0 497
ENST00000396522 METTL3-008 retained_intron Homo_sapiens 0 741
ENST00000448790 TOX4-201 protein_coding Homo_sapiens 0 191
ENST00000536201 METTL3-002 retained_intron Homo_sapiens 0 1203
ENST00000537163 METTL3-003 nonsense_mediated_decay Homo_sapiens 0 1147
ENST00000538267 METTL3-007 retained_intron Homo_sapiens 0 894
ENST00000539760 METTL3-010 nonsense_mediated_decay Homo_sapiens 0 1236
ENST00000542054 METTL3-011 retained_intron Homo_sapiens 0 950
ENST00000543235 METTL3-006 nonsense_mediated_decay Homo_sapiens 0 935
ENST00000544248 METTL3-004 nonsense_mediated_decay Homo_sapiens 0 996
ENST00000544500 METTL3-009 retained_intron Homo_sapiens 0 1940
ENST00000545319 METTL3-013 processed_transcript Homo_sapiens 0 209
ENST00000545788 METTL3-012 processed_transcript Homo_sapiens 0 209
ENST00000613569 TOX4-001 protein_coding Homo_sapiens 0 191

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