C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger and SCAN domain containing 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543588 ZSCAN21-201 ENSG00000166529 9606 + 7:100049799-100065037 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000543588
Transcript ID Muscle Testis
ENST00000543588 1.802±0.00 2.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002F6 CIL_0002F6_0001 CGP 7:100015572-100065038
CIL_0005LO CIL_0005LO_0001 CGP 7:100049774-100082548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110959 Zscan21-005 protein_coding Mus_musculus 0 793
ENSMUST00000110960 Zscan21-002 protein_coding Mus_musculus 0 793
ENSMUST00000080732 Zscan21-004 protein_coding Mus_musculus 0 793
ENSMUST00000110961 Zscan21-001 protein_coding Mus_musculus 0 793
ENSMUST00000062350 Zscan21-003 protein_coding Mus_musculus 0 793
ENSMUST00000134522 Zkscan17-004 processed_transcript Mus_musculus 0.0000000000002 82
ENSMUST00000013262 Zkscan17-001 protein_coding Mus_musculus 0.0000000000002 82

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