C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134522 Zkscan17-004 ENSMUSG00000020472 10090 - 11:59499544-59506220 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000134522
Transcript ID Ovary Placenta Testis
ENSMUST00000134522 29.896±0.00 21.651±3.48 46.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TS CIL_0006TS_0002 CGP 11:59485520-59566956

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292450 ZSCAN21-001 protein_coding Homo_sapiens 6e-23 113
ENST00000294753 ZNF496-001 protein_coding Homo_sapiens 0 573
ENST00000438937 ZSCAN21-002 protein_coding Homo_sapiens 2e-23 113
ENST00000456748 ZSCAN21-004 protein_coding Homo_sapiens 6e-23 113
ENST00000461277 ZNF496-002 protein_coding Homo_sapiens 2e-30 139
ENST00000477297 ZSCAN21-003 processed_transcript Homo_sapiens 2e-23 113
ENST00000477903 ZNF496-006 processed_transcript Homo_sapiens 0 614
ENST00000478225 ZNF496-005 processed_transcript Homo_sapiens 0 573
ENST00000543588 ZSCAN21-201 protein_coding Homo_sapiens 0.0000000000002 82

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