C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cerebral cavernous malformation 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000544363  |
CCM2-203 |
ENSG00000136280 |
9606 | + |
7:45000188-45076469  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000SD | CIL_0000SD_0001 | CGP | 7:44962662-45076469 |
| CIL_0000S8 | CIL_0000S8_0001 | CGP | 7:44999475-45088914 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001570 | IMP | vasculogenesis |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0007229 | TAS | integrin-mediated signaling pathway |
| GO:0051403 | TAS | stress-activated MAPK cascade |
| GO:0061154 | IMP | endothelial tube morphogenesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000000388
|
Ccm2-001 | protein_coding | Mus_musculus | 0 | 782 |
|
ENSMUST00000109721
|
Ccm2-201 | protein_coding | Mus_musculus | 0 | 763 |
|
ENSMUST00000109722
|
Ccm2-002 | protein_coding | Mus_musculus | 0 | 749 |
|
ENSMUST00000160633
|
Ccm2-006 | protein_coding | Mus_musculus | 0 | 643 |
|
ENSMUST00000159007
|
Ccm2-005 | protein_coding | Mus_musculus | 0 | 357 |
|
ENSMUST00000161501
|
Ccm2-004 | nonsense_mediated_decay | Mus_musculus | 0 | 292 |
|
ENSMUST00000161667
|
Ccm2-007 | retained_intron | Mus_musculus | 0 | 268 |
