C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544967 USP28-006 ENSG00000048028 9606 - 11:113798092-113829467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544967 0.846±0.00 1.675±0.00 0.379±0.00 0.659±0.32 1.427±0.54 2.784±0.00 5.425±0.00 1.757±0.00 0.840±0.10 1.388±0.16 5.004±0.00 3.344±1.00 1.197±0.28 4.151±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C0 CIL_0002C0_0002 CGP 11:113797874-113946565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047349 Usp28-201 protein_coding Mus_musculus 0 2477

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