C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 500
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545009 ZNF500-008 ENSG00000103199 9606 - 16:4750814-4767216 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaENST00000545009
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta
ENST00000545009 2.814±0.00 4.490±0.00 2.439±0.08 2.702±0.00 1.126±0.00 0.999±0.63 2.784±1.69 1.277±0.00 6.348±2.76 1.226±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004X CIL_00004X_0001 CGP 16:4696510-4749396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 0 193
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 0 193
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 0 193
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 0 193
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 5e-39 167
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 2e-34 152
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 2e-34 152
ENSMUST00000163766 Zscan29-201 protein_coding Mus_musculus 3e-31 141
ENSMUST00000146243 Zscan29-002 protein_coding Mus_musculus 3e-31 141
ENSMUST00000079024 Zscan29-004 protein_coding Mus_musculus 3e-31 141
ENSMUST00000110661 Zscan29-001 protein_coding Mus_musculus 3e-31 141
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 9e-27 126
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 9e-27 126
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 9e-27 126
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 4e-25 121
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 3e-22 111
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 3e-22 111
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 3e-22 111

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