C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenophosphate synthetase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545675 SEPHS1-201 ENSG00000086475 9606 - 10:13317439-13348298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000545675
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000545675 1.541±0.00 2.552±0.00 1.412±0.00 1.407±0.00 3.051±0.00 2.086±0.00 4.429±0.00 0.823±0.00 65.765±0.00 11.726±9.44 10.111±6.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0001 VISTA 10:13045564-13647145
CIL_00062N CIL_00062N_0002 CGP 10:13317424-13528974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004756 IEA selenide, water dikinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005525 TAS GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006464 TAS cellular protein modification process
GO:0016310 IEA phosphorylation
GO:0031965 IDA nuclear membrane
GO:0042803 IDA protein homodimerization activity
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027973 Sephs1-001 protein_coding Mus_musculus 0 2241
ENSMUST00000115019 Sephs1-002 protein_coding Mus_musculus 0 2235
ENSMUST00000140045 Sephs1-004 processed_transcript Mus_musculus 0 675

Loading