C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | coronin, actin binding protein, 1C | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000546571  |
CORO1C-014 |
ENSG00000110880 |
9606 | - |
12:108658881-108730551  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001VQ | CIL_0001VQ_0001 | CGP | 12:108622277-108731596 |
| CIL_0001GO | CIL_0001GO_0002 | CGP | 12:108645109-108857590 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0015629 | IEA | actin cytoskeleton |
| GO:0030036 | IEA | actin cytoskeleton organization |
| GO:0051015 | IEA | actin filament binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000004646
|
Coro1c-001 | protein_coding | Mus_musculus | 0 | 619 |
|
ENSMUST00000164980
|
Coro1c-002 | nonsense_mediated_decay | Mus_musculus | 0 | 558 |
|
ENSMUST00000166647
|
Coro1c-006 | processed_transcript | Mus_musculus | 0 | 401 |
|
ENSMUST00000060680
|
2010001K21Rik-201 | pseudogene | Mus_musculus | 0 | 324 |
|
ENSMUST00000163264
|
Coro1c-004 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000168493
|
Coro1c-007 | processed_transcript | Mus_musculus | 0 | 233 |
|
ENSMUST00000163995
|
Coro1c-008 | retained_intron | Mus_musculus | 0.0000000006 | 69 |
