C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2010001K21 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060680 2010001K21Rik-201 ENSMUSG00000051606 10090 + 13:47010673-47011195 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060680 0.386±0.16 0.157±0.08 0.385±0.00 0.390±0.00 0.409±0.26 3.524±0.97 0.202±0.12 0.080±0.02 2.059±0.28 0.178±0.01 4.041±1.30 0.266±0.31 1.289±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0003RK CIL_0003RK_0002 CGP 13:46749087-47014850
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261401 CORO1C-001 protein_coding Homo_sapiens 0 424
ENST00000420959 CORO1C-201 protein_coding Homo_sapiens 0 322
ENST00000421578 CORO1C-009 protein_coding Homo_sapiens 4e-23 113
ENST00000541050 CORO1C-007 protein_coding Homo_sapiens 0 322
ENST00000546571 CORO1C-014 protein_coding Homo_sapiens 0 324
ENST00000547170 CORO1C-015 retained_intron Homo_sapiens 0 322
ENST00000547294 CORO1C-021 protein_coding Homo_sapiens 0 320
ENST00000549772 CORO1C-008 protein_coding Homo_sapiens 0 322
ENST00000550032 CORO1C-016 protein_coding Homo_sapiens 0 322
ENST00000550542 CORO1C-002 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000551044 CORO1C-013 protein_coding Homo_sapiens 0 322
ENST00000551550 CORO1C-012 protein_coding Homo_sapiens 0 322
ENST00000552871 CORO1C-011 protein_coding Homo_sapiens 2e-23 113

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