C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021193-ENSDARG00000010031 CGP 7955 5:33520724-33566528
GeneTranscriptPositionBiotype
ENSDARG00000010031 (ssh1b)
slingshot homolog 1b (Drosophila) 		ENSDART00000010851 (ssh1b-201) 33555636-33566201 protein_coding
ENSDART00000142919 (ssh1b-001) 33556424-33566528 protein_coding
ENSDARG00000021193 (coro1cb)
coronin, actin binding protein, 1Cb 		ENSDART00000039796 (coro1cb-201) 33522140-33534776 protein_coding
ENSDART00000140640 (coro1cb-002) 33534555-33542177 protein_coding
ENSDART00000141446 (coro1cb-001) 33520724-33539120 protein_coding
ENSDART00000147814 (coro1cb-003) 33529058-33539083 protein_coding
CIL_0001GO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110880-ENSG00000084112 CGP 9606 12:108645109-108857590
GeneTranscriptPositionBiotype
ENSG00000110880 (CORO1C)
coronin, actin binding protein, 1C 		ENST00000261401 (CORO1C-001) 108645109-108731596 protein_coding
ENST00000420959 (CORO1C-201) 108645115-108702998 protein_coding
ENST00000421578 (CORO1C-009) 108647380-108696402 protein_coding
ENST00000541050 (CORO1C-007) 108646567-108730843 protein_coding
ENST00000546571 (CORO1C-014) 108658881-108730551 protein_coding
ENST00000546705 (CORO1C-020) 108646569-108652345 protein_coding
ENST00000547170 (CORO1C-015) 108662114-108701924 retained_intron
ENST00000547294 (CORO1C-021) 108658823-108701981 protein_coding
ENST00000547361 (CORO1C-018) 108652045-108658822 retained_intron
ENST00000549384 (CORO1C-003) 108646989-108731518 processed_transcript
ENST00000549387 (CORO1C-019) 108648687-108649671 retained_intron
ENST00000549772 (CORO1C-008) 108647403-108703075 protein_coding
ENST00000550032 (CORO1C-016) 108658859-108701356 protein_coding
ENST00000550542 (CORO1C-002) 108647384-108731526 nonsense_mediated_decay
ENST00000551044 (CORO1C-013) 108662023-108730669 protein_coding
ENST00000551059 (CORO1C-010) 108700940-108731518 retained_intron
ENST00000551550 (CORO1C-012) 108658878-108731153 protein_coding
ENST00000552030 (CORO1C-017) 108648963-108658832 processed_transcript
ENST00000552871 (CORO1C-011) 108657362-108731518 protein_coding
ENSG00000207622 (MIR619)
microRNA 619 		ENST00000384890 (MIR619-201) 108836908-108837006 miRNA
ENSG00000274598 (RP11-423G4.10)
 ENST00000612818 (RP11-423G4.10-001) 108833721-108834384 sense_intronic
CIL_0001GO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004530-ENSMUSG00000042121 CGP 10090 5:113842436-113993894
GeneTranscriptPositionBiotype
ENSMUSG00000004530 (Coro1c)
coronin, actin binding protein 1C 		ENSMUST00000004646 (Coro1c-001) 113842436-113908758 protein_coding
ENSMUST00000111283 (Coro1c-010) 113848108-113849670 retained_intron
ENSMUST00000163264 (Coro1c-004) 113865701-113882945 protein_coding
ENSMUST00000163995 (Coro1c-008) 113845243-113850862 retained_intron
ENSMUST00000164980 (Coro1c-002) 113842436-113908705 nonsense_mediated_decay
ENSMUST00000166647 (Coro1c-006) 113848553-113874648 processed_transcript
ENSMUST00000168399 (Coro1c-005) 113865759-113882431 protein_coding
ENSMUST00000168493 (Coro1c-007) 113848612-113858774 processed_transcript
ENSMUST00000168634 (Coro1c-009) 113845254-113849865 retained_intron
ENSMUST00000171630 (Coro1c-003) 113877063-113908645 retained_intron
ENSMUST00000172016 (Coro1c-011) 113846189-113847620 retained_intron
ENSMUSG00000042121 (Ssh1)
slingshot homolog 1 (Drosophila) 		ENSMUST00000077689 (Ssh1-003) 113942192-113989743 protein_coding
ENSMUST00000112298 (Ssh1-002) 113939765-113993779 protein_coding
ENSMUST00000159510 (Ssh1-004) 113961393-113993827 nonsense_mediated_decay
ENSMUST00000159592 (Ssh1-001) 113937094-113993894 protein_coding
ENSMUST00000162322 (Ssh1-006) 113966604-113993767 retained_intron
ENSMUST00000162396 (Ssh1-005) 113965602-113966756 protein_coding
ENSMUSG00000090458 (Gm17122)
predicted gene 17122 		ENSMUST00000166047 (Gm17122-001) 113842601-113843116 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GO_0001ENSDARG00000010031ENSDART00000010851ENSDART00000142919ENSDARG00000021193ENSDART00000039796ENSDART00000140640ENSDART00000141446ENSDART00000147814CIL_0001GO_0002ENSG00000110880ENST00000261401ENST00000420959ENST00000421578ENST00000541050ENST00000546571ENST00000546705ENST00000547170ENST00000547294ENST00000547361ENST00000549384ENST00000549387ENST00000549772ENST00000550032ENST00000550542ENST00000551044ENST00000551059ENST00000551550ENST00000552030ENST00000552871ENSG00000207622ENST00000384890ENSG00000274598ENST00000612818CIL_0001GO_0003ENSMUSG00000004530ENSMUST00000004646ENSMUST00000111283ENSMUST00000163264ENSMUST00000163995ENSMUST00000164980ENSMUST00000166647ENSMUST00000168399ENSMUST00000168493ENSMUST00000168634ENSMUST00000171630ENSMUST00000172016ENSMUSG00000042121ENSMUST00000077689ENSMUST00000112298ENSMUST00000159510ENSMUST00000159592ENSMUST00000162322ENSMUST00000162396ENSMUSG00000090458ENSMUST00000166047
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GO_0001ENSDARG00000010031ENSDART00000010851ENSDART00000142919ENSDARG00000021193ENSDART00000039796ENSDART00000141446CIL_0001GO_0002ENSG00000110880ENST00000261401ENST00000420959ENST00000421578ENST00000546705ENST00000549384ENST00000550542ENST00000552030ENSG00000207622ENST00000384890ENSG00000274598ENST00000612818CIL_0001GO_0003ENSMUSG00000004530ENSMUST00000004646ENSMUST00000164980ENSMUSG00000042121ENSMUST00000077689ENSMUST00000112298ENSMUST00000159592ENSMUSG00000090458ENSMUST00000166047
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010031 ENSDART00000010851 N/A N/A N/A 4.150±0.00 N/A N/A 0.592±0.00 0.276±0.00 0.047±0.00 N/A N/A N/A N/A N/A
ENSDART00000142919 N/A N/A N/A 4.823±1.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000021193 ENSDART00000039796 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A
ENSDART00000140640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141446 N/A N/A N/A 59.403±22.81 N/A N/A 53.127±14.10 0.733±0.00 0.123±0.00 N/A 4.127±0.00 N/A N/A N/A
ENSDART00000147814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110880 ENST00000261401 21.327±0.00 7.527±0.00 1.024±0.00 18.208±0.00 23.656±21.23 20.213±14.79 7.976±0.00 N/A 6.095±3.17 16.055±9.86 0.481±0.00 20.300±12.10 15.546±4.09 22.564±15.39
ENST00000420959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.540±0.00 N/A N/A
ENST00000421578 N/A N/A N/A 4.451±0.00 6.412±0.00 5.078±0.00 1.205±0.00 3.040±0.00 N/A 6.057±0.00 N/A 7.310±0.00 N/A N/A
ENST00000541050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546705 N/A N/A N/A N/A 15.832±0.00 N/A N/A 5.730±0.00 N/A N/A N/A N/A N/A N/A
ENST00000547170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549384 N/A N/A N/A N/A N/A 6.247±0.00 N/A N/A N/A N/A 1.231±0.00 N/A N/A N/A
ENST00000549387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.089±0.00 N/A N/A N/A
ENST00000551044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.276±0.00 N/A N/A N/A
ENST00000552871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207622 ENST00000384890 N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274598 ENST00000612818 0.288±0.00 0.249±0.00 0.706±0.00 N/A 0.335±0.02 0.363±0.00 0.273±0.23 0.194±0.00 0.075±0.00 0.387±0.13 N/A 0.257±0.18 0.065±0.00 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004530 ENSMUST00000004646 37.520±12.26 9.504±2.90 40.474±7.41 34.415±21.80 16.705±2.84 49.928±6.08 9.269±1.90 20.679±1.05 10.097±6.37 53.631±0.58 2.312±0.55 29.444±10.23 39.510±23.67 6.882±0.46
ENSMUST00000111283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164980 N/A 12.134±2.93 N/A N/A 11.187±2.73 27.903±7.06 N/A N/A 2.130±0.43 N/A 0.858±0.00 10.768±4.83 3.549±0.00 0.322±0.00
ENSMUST00000166647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042121 ENSMUST00000077689 N/A N/A N/A N/A 2.715±0.00 1.224±0.00 N/A N/A 1.331±0.14 N/A 0.432±0.06 N/A 4.660±0.22 N/A
ENSMUST00000112298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.978±0.00 N/A
ENSMUST00000159510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159592 7.589±2.49 2.369±1.92 3.751±0.83 2.644±1.47 6.445±1.30 3.468±1.62 2.530±0.62 4.101±0.51 1.273±0.41 9.233±2.53 0.738±0.06 5.313±3.97 3.108±0.84 1.560±0.12
ENSMUST00000162322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090458 ENSMUST00000166047 N/A N/A N/A 208.315±0.00 N/A N/A N/A N/A N/A N/A N/A 148.438±88.16 577.532±277.40 85.915±0.00

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