C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(rC) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547048 PCBP2-010 ENSG00000197111 9606 + 12:53467723-53479821 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungMuscleENST00000547048
Transcript ID Bladder Lung Muscle
ENST00000547048 13.039±0.00 19.575±0.00 6.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00033G CIL_00033G_0002 CGP 12:53452102-53500063

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108838 Pcbp2-203 protein_coding Mus_musculus 0 926
ENSMUST00000078404 Pcbp2-202 protein_coding Mus_musculus 0 926
ENSMUST00000077037 Pcbp2-201 protein_coding Mus_musculus 0 926
ENSMUST00000023812 Map3k12-002 protein_coding Mus_musculus 0 540
ENSMUST00000119050 Gm12186-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000171565 Map3k12-003 protein_coding Mus_musculus 0 219
ENSMUST00000053015 Pcbp1-001 protein_coding Mus_musculus 0.00000005 64

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