C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 12 open reading frame 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548913 C12orf54-005 ENSG00000177627 9606 + 12:48486708-48488500 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLiverOvaryPlacentaENST00000548913
Transcript ID Adipose Colon Kidney Liver Ovary Placenta
ENST00000548913 0.044±0.00 0.097±0.00 0.050±0.00 0.066±0.00 0.380±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068L CIL_00068L_0001 CGP 12:48482503-48529897

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 510
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 505
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 483
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 455
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 390
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 390
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 292

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