C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription elongation regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549332 TCERG1-016 ENSG00000113649 9606 + 5:146447346-146510765 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000549332
Transcript ID Muscle Testis
ENST00000549332 1.832±1.58 5.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AK CIL_0001AK_0001 CGP 5:146339024-146511961
CIL_0001AD CIL_0001AD_0001 CGP 5:146447311-146516190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173642 Tcerg1-002 nonsense_mediated_decay Mus_musculus 0 4887
ENSMUST00000025375 Tcerg1-001 protein_coding Mus_musculus 0 4283
ENSMUST00000024831 Tff1-001 protein_coding Mus_musculus 0.0000006 58

Loading