C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LETM1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550100 LETMD1-009 ENSG00000050426 9606 + 12:51048344-51060303 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000550100
Transcript ID Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000550100 9.263±0.00 10.058±0.00 18.077±0.00 3.035±0.00 7.876±0.00 8.872±0.00 0.945±0.00 12.843±0.00 5.559±1.23 8.771±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B3 CIL_0007B3_0001 CGP 12:51047962-51083664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005741 IEA mitochondrial outer membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037001 Letmd1-201 protein_coding Mus_musculus 0 407

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