C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550164 SMARCC2-006 ENSG00000139613 9606 - 12:56163328-56189476 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryENST00000550164
Transcript ID Brain Breast Heart Ovary
ENST00000550164 8.704±0.00 5.397±0.00 2.401±0.00 8.993±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099131 Smarcc2-202 protein_coding Mus_musculus 0 4390
ENSMUST00000105235 Smarcc2-203 protein_coding Mus_musculus 0 2857
ENSMUST00000026433 Smarcc2-201 protein_coding Mus_musculus 0 2311

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