C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cyclin-dependent kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553237 CDK4-003 ENSG00000135446 9606 - 12:57748520-57752326 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000553237
Transcript ID Muscle
ENST00000553237 3.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KQ CIL_0002KQ_0002 CGP 12:57723761-57750211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142558 Cdk4-009 nonsense_mediated_decay Mus_musculus 0 1074
ENSMUST00000006911 Cdk4-001 protein_coding Mus_musculus 0 673
ENSMUST00000125682 Cdk4-005 protein_coding Mus_musculus 0 575
ENSMUST00000133115 Cdk4-006 protein_coding Mus_musculus 0 514
ENSMUST00000120226 Cdk4-004 protein_coding Mus_musculus 0 409
ENSMUST00000140254 Cdk4-003 retained_intron Mus_musculus 0 399
ENSMUST00000120079 Gm7158-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000123456 Cdk4-007 retained_intron Mus_musculus 0 196
ENSMUST00000118922 Gm13521-001 processed_pseudogene Mus_musculus 8e-29 132

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