C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tyrosyl-DNA phosphodiesterase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553617 TDP1-010 ENSG00000042088 9606 + 14:89955941-89984587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverMuscleENST00000553617
Transcript ID Colon Heart Kidney Liver Muscle
ENST00000553617 5.759±0.00 0.055±0.00 0.507±0.00 0.890±0.00 0.126±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C6 CIL_0005C6_0001 CGP 14:89794669-90044768
CIL_0001TZ CIL_0001TZ_0001 CGP 14:89954939-90185857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0008081 IEA phosphoric diester hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021594 Tdp1-201 protein_coding Mus_musculus 0 676
ENSMUST00000151019 Tdp1-002 retained_intron Mus_musculus 0 676
ENSMUST00000153627 Tdp1-001 protein_coding Mus_musculus 0 676

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