C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553854 RP11-226P1.3-001 ENSG00000258841 9606 + 14:81661428-81662874 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000553854
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000553854 0.103±0.00 0.089±0.00 0.064±0.00 0.097±0.00 0.196±0.00 0.024±0.00 0.044±0.00 0.023±0.00 0.016±0.00 0.023±0.00 0.041±0.00 0.026±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 532
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 399
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 219
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 215

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