C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6170
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187672 RP23-307G23.3-001 ENSMUSG00000100078 10090 - 1:128520073-128521460 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000187672
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000187672 0.983±0.32 0.149±0.05 9.569±2.41 1.253±1.12 1.074±0.95 0.552±0.17 0.178±0.05 0.596±0.19 0.883±1.56 0.679±0.27 0.052±0.03 0.545±0.32 0.253±0.19 0.395±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077L CIL_00077L_0002 CGP 1:128363707-128592293

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 1794
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 1794
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 1450
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 1794
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 571
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 1487
ENST00000395772 EEF1A1P15-001 processed_pseudogene Homo_sapiens 0 717
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 974
ENST00000403956 RP3-406A7.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 1666
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 704
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 1421
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 1517
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 881
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 1419
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 1103
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 774
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 1142
ENST00000430685 RP11-214N15.5-001 processed_pseudogene Homo_sapiens 0 281
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 1759
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 1783
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 850
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 837
ENST00000447052 EEF1A1P1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 1242
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 1502
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 1546
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 828
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 1310
ENST00000491404 EEF1A1-014 processed_transcript Homo_sapiens 0 472
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 643
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 1356
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 1688
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 1471
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 1639
ENST00000514852 EEF1A1P20-001 processed_pseudogene Homo_sapiens 0 791
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 1701
ENST00000525759 CTD-2063L20.1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 1382
ENST00000553854 RP11-226P1.3-001 processed_pseudogene Homo_sapiens 0 532
ENST00000554413 EEF1A1P33-001 processed_pseudogene Homo_sapiens 0 874
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 1493
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 1483
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 1408
ENST00000605239 AP000436.4-001 processed_pseudogene Homo_sapiens 0 588
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 1164
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 1742

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