C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129380 Eef1a1-004 ENSMUSG00000037742 10090 - 9:78478684-78479716 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000129380
Transcript ID Adrenal
ENSMUST00000129380 291.424±81.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151
CIL_0006PR CIL_0006PR_0002 CGP 9:78478449-78588041

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 568
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 568
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 438
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 568
ENST00000395772 EEF1A1P15-001 processed_pseudogene Homo_sapiens 0 342
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000403956 RP3-406A7.1-001 processed_pseudogene Homo_sapiens 0 237
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 470
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 370
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 383
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 409
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 292
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 398
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 357
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 311
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 361
ENST00000430685 RP11-214N15.5-001 processed_pseudogene Homo_sapiens 0 281
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 479
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 486
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 453
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 315
ENST00000447052 EEF1A1P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 316
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 409
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 403
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 944
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 420
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 459
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 438
ENST00000514852 EEF1A1P20-001 processed_pseudogene Homo_sapiens 0 309
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 466
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 433
ENST00000553854 RP11-226P1.3-001 processed_pseudogene Homo_sapiens 0 219
ENST00000554413 EEF1A1P33-001 processed_pseudogene Homo_sapiens 0 294
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 407
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 409
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 322
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 568
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 549

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