C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and fibronectin type III domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554120 LRFN5-006 ENSG00000165379 9606 + 14:41608415-41904549 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverENST00000554120
Transcript ID Adipose Liver
ENST00000554120 0.173±0.00 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VL CIL_0003VL_0001 CGP 14:39397669-41904549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119481 Lrfn5-001 protein_coding Mus_musculus 0 2274
ENSMUST00000055815 Lrfn5-004 protein_coding Mus_musculus 0 2274
ENSMUST00000189933 Lrfn5-005 retained_intron Mus_musculus 0 399
ENSMUST00000138980 Lrfn5-003 processed_transcript Mus_musculus 0 333
ENSMUST00000130887 Lrfn5-002 processed_transcript Mus_musculus 0 215

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