C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | serine hydroxymethyltransferase 2 (mitochondrial) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554604  |
SHMT2-036 |
ENSG00000182199 |
9606 | + |
12:57230394-57232801  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002KV | CIL_0002KV_0002 | CGP | 12:57216795-57234935 |
| CIL_0002KW | CIL_0002KW_0002 | CGP | 12:57229327-57240715 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004372 | IEA | glycine hydroxymethyltransferase activity |
| GO:0005739 | IDA | mitochondrion |
| GO:0006544 | IEA | glycine metabolic process |
| GO:0006563 | IEA | L-serine metabolic process |
| GO:0015630 | IDA | microtubule cytoskeleton |
| GO:0030170 | IEA | pyridoxal phosphate binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000026470
|
Shmt2-201 | protein_coding | Mus_musculus | 0 | 708 |
|
ENSMUST00000118776
|
Gm15544-001 | processed_pseudogene | Mus_musculus | 0 | 475 |
