C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554662 RPL21P5-001 ENSG00000258640 9606 - 14:31111569-31112239 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000554662
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000554662 0.137±0.00 0.169±0.00 0.325±0.27 0.123±0.01 0.103±0.00 0.160±0.00 0.112±0.00 0.133±0.00 0.079±0.00 0.051±0.00 0.165±0.08 0.167±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EG CIL_0004EG_0001 CGP 14:31025106-31207804
CIL_0004EH CIL_0004EH_0001 CGP 14:31100112-31420582

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 4.06377e-44 182
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 3e-20 102

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