C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11703
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118352 Gm11703-001 ENSMUSG00000083394 10090 - 11:115724326-115724808 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118352
Transcript ID Adipose Bladder Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118352 0.240±0.13 0.839±0.67 0.636±0.26 0.258±0.00 0.104±0.00 1.123±1.35 0.064±0.00 0.400±0.20 0.298±0.33 0.147±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007J0 CIL_0007J0_0002 CGP 11:115644045-115799366

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 270
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 593
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 593
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 593
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 593
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 488
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 588
ENST00000398929 AC009414.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 577
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 399
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 549
ENST00000404609 RP3-393E18.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 355
ENST00000407436 RP11-360O19.5-001 processed_pseudogene Homo_sapiens 0 451
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 412
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000418453 RPL21P111-001 processed_pseudogene Homo_sapiens 0 427
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000427200 AC009414.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 300
ENST00000433468 RP11-336N8.3-001 processed_pseudogene Homo_sapiens 0 472
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 429
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000441469 RP11-365O16.5-001 processed_pseudogene Homo_sapiens 0 272
ENST00000442539 RPL21P135-001 processed_pseudogene Homo_sapiens 0 326
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 359
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 0 326
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 532
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 294
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 451
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 555
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000463506 RP11-112N19.1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000463521 RPL21P10-001 processed_pseudogene Homo_sapiens 0 355
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 532
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 268
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 344
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 560
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 501
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 0 202
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 270
ENST00000479921 RPL21P103-001 processed_pseudogene Homo_sapiens 0 287
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 527
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 497
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 573
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000485756 RPL21-010 retained_intron Homo_sapiens 0 398
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 564
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 549
ENST00000486904 RP11-731J8.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000488305 RPL21P13-001 processed_pseudogene Homo_sapiens 0 431
ENST00000490908 RPL21P127-001 processed_pseudogene Homo_sapiens 0 470
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 420
ENST00000492168 RP11-330L19.2-001 processed_pseudogene Homo_sapiens 0 355
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 0 311
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 470
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000495378 RP11-91P24.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 593
ENST00000496249 RPL21P106-001 processed_pseudogene Homo_sapiens 0 385
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 460
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 518
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 411
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 265
ENST00000554662 RPL21P5-001 processed_pseudogene Homo_sapiens 0 340
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 488
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 353
ENST00000572227 RP11-1099M24.8-001 processed_pseudogene Homo_sapiens 0 291
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000603164 AC005776.1-001 processed_pseudogene Homo_sapiens 0 213
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 429

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