C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tandem C2 domains, nuclear
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556018 TC2N-002 ENSG00000165929 9606 - 14:91782823-91836526 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverMuscleOvaryPlacentaTestisENST00000556018
Transcript ID Adipose Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENST00000556018 3.176±0.00 2.503±0.00 0.247±0.00 6.384±0.00 2.509±0.00 0.501±0.00 2.638±0.00 0.408±0.16 3.914±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707
CIL_000538 CIL_000538_0001 CGP 14:91580696-91867536
CIL_00061L CIL_00061L_0002 CGP 14:91779751-91947987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0010468 IMP regulation of gene expression
GO:0030193 IMP regulation of blood coagulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160715 Tc2n-004 protein_coding Mus_musculus 0 1613
ENSMUST00000160830 Tc2n-003 protein_coding Mus_musculus 0 1020
ENSMUST00000110047 Tc2n-002 nonsense_mediated_decay Mus_musculus 0 1020
ENSMUST00000162735 Tc2n-001 protein_coding Mus_musculus 0 1020

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