C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: prostaglandin reductase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556219 PTGR2-005 ENSG00000140043 9606 + 14:73858138-73884579 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0003PQ CIL_0003PQ_0001 CGP 14:73715122-73886827

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146377 Ptgr2-006 protein_coding Mus_musculus 0 575
ENSMUST00000147363 Ptgr2-005 protein_coding Mus_musculus 0 575
ENSMUST00000135001 Ptgr2-002 protein_coding Mus_musculus 0 575
ENSMUST00000123614 Ptgr2-001 protein_coding Mus_musculus 0 575
ENSMUST00000138733 Ptgr2-004 retained_intron Mus_musculus 0 420
ENSMUST00000123693 Ptgr2-003 nonsense_mediated_decay Mus_musculus 0 405
ENSMUST00000128541 Ptgr2-008 processed_transcript Mus_musculus 0 265
ENSMUST00000150720 Ptgr2-009 processed_transcript Mus_musculus 1e-32 147

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