C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tandem C2 domains, nuclear
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556590 TC2N-007 ENSG00000165929 9606 - 14:91782927-91798998 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000556590
Transcript ID Kidney Ovary Placenta Testis
ENST00000556590 0.371±0.00 4.767±0.00 1.186±0.00 5.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707
CIL_000538 CIL_000538_0001 CGP 14:91580696-91867536
CIL_00061L CIL_00061L_0002 CGP 14:91779751-91947987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110047 Tc2n-002 nonsense_mediated_decay Mus_musculus 0 841
ENSMUST00000162735 Tc2n-001 protein_coding Mus_musculus 0 841
ENSMUST00000160830 Tc2n-003 protein_coding Mus_musculus 0 817
ENSMUST00000160715 Tc2n-004 protein_coding Mus_musculus 0 599

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