C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LYR motif containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556885 LYRM5-002 ENSG00000205707 9606 + 12:25195265-25205015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000556885
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000556885 3.742±0.00 13.141±0.00 4.270±0.00 8.056±0.00 7.181±5.20 11.013±0.00 15.943±0.00 6.873±3.98 8.899±0.00 4.510±1.61 14.008±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XD CIL_0004XD_0001 CGP 12:25108420-25209645
CIL_0006UC CIL_0006UC_0001 CGP 12:25195216-25250936

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111726 Lyrm5-001 protein_coding Mus_musculus 0 403
ENSMUST00000111719 Lyrm5-007 protein_coding Mus_musculus 0 399
ENSMUST00000111721 Lyrm5-008 protein_coding Mus_musculus 0 399
ENSMUST00000111724 Lyrm5-003 protein_coding Mus_musculus 0 399
ENSMUST00000111723 Lyrm5-006 protein_coding Mus_musculus 0 399
ENSMUST00000039729 Lyrm5-002 protein_coding Mus_musculus 0 399
ENSMUST00000111725 Lyrm5-004 protein_coding Mus_musculus 0 399

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