C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulocalbin 2, EF-hand calcium binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557805 RCN2-006 ENSG00000117906 9606 + 15:76931871-76947489 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleOvaryPlacentaTestisENST00000557805
Transcript ID Bladder Muscle Ovary Placenta Testis
ENST00000557805 1.102±0.00 0.364±0.00 84.648±0.00 89.846±0.00 213.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114276 Rcn2-001 protein_coding Mus_musculus 0 466
ENSMUST00000147842 Rcn2-002 nonsense_mediated_decay Mus_musculus 0 440
ENSMUST00000144869 Rcn2-004 retained_intron Mus_musculus 9e-37 158

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