C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-serine-threonine phosphatase interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557995 PSTPIP1-011 ENSG00000140368 9606 + 15:77028343-77037313 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000557995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000557995 1.359±0.00 4.488±0.00 0.432±0.00 2.421±0.00 0.318±0.00 0.441±0.00 0.577±0.14 2.147±0.00 2.180±0.63 1.741±0.01 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332
CIL_0003NQ CIL_0003NQ_0002 CGP 15:76993359-77083984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059206 Pstpip1-001 protein_coding Mus_musculus 0 789
ENSMUST00000147360 Pstpip1-002 retained_intron Mus_musculus 0 654
ENSMUST00000138646 Pstpip1-003 retained_intron Mus_musculus 0 375
ENSMUST00000132800 Pstpip1-006 retained_intron Mus_musculus 0 372
ENSMUST00000144638 Pstpip1-004 processed_transcript Mus_musculus 0 339

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