C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558002 ZNF280D-004 ENSG00000137871 9606 - 15:56666495-56733507 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000558002
Transcript ID Brain Colon
ENST00000558002 3.067±0.00 2.126±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098576 Zfp280d-011 protein_coding Mus_musculus 0 1777
ENSMUST00000184517 Zfp280d-003 protein_coding Mus_musculus 0 1777
ENSMUST00000183410 Zfp280d-020 protein_coding Mus_musculus 0 1733
ENSMUST00000183801 Zfp280d-021 nonsense_mediated_decay Mus_musculus 0 1709
ENSMUST00000184036 Zfp280d-001 protein_coding Mus_musculus 0 1670
ENSMUST00000184399 Zfp280d-002 nonsense_mediated_decay Mus_musculus 0 1230
ENSMUST00000184053 Zfp280d-010 nonsense_mediated_decay Mus_musculus 0 1068
ENSMUST00000184786 Zfp280d-006 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000185020 Zfp280d-007 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000184248 Zfp280d-018 retained_intron Mus_musculus 0 377
ENSMUST00000184141 Zfp280d-015 retained_intron Mus_musculus 0 340
ENSMUST00000183400 Zfp280d-012 retained_intron Mus_musculus 0 292
ENSMUST00000183545 Zfp280d-016 retained_intron Mus_musculus 5e-39 167
ENSMUST00000184639 Zfp280d-005 processed_transcript Mus_musculus 9e-17 94
ENSMUST00000184968 Zfp280d-004 processed_transcript Mus_musculus 0.000000000000004 88

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