C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-serine-threonine phosphatase interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558012 PSTPIP1-001 ENSG00000140368 9606 + 15:76995085-77037332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaENST00000558012
Transcript ID Breast Placenta
ENST00000558012 0.710±0.00 1.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332
CIL_0003NQ CIL_0003NQ_0002 CGP 15:76993359-77083984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IEA stress fiber
GO:0003779 IEA actin binding
GO:0003824 IEA catalytic activity
GO:0005515 IPI:IEA protein binding
GO:0005826 IEA actomyosin contractile ring
GO:0005829 TAS cytosol
GO:0006897 IEA endocytosis
GO:0006954 IEA inflammatory response
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0019903 IEA protein phosphatase binding
GO:0032154 IEA cleavage furrow
GO:0035872 TAS nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0042995 IEA cell projection
GO:0045087 TAS innate immune response
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059206 Pstpip1-001 protein_coding Mus_musculus 0 1544
ENSMUST00000147360 Pstpip1-002 retained_intron Mus_musculus 0 889
ENSMUST00000138646 Pstpip1-003 retained_intron Mus_musculus 0 889
ENSMUST00000144638 Pstpip1-004 processed_transcript Mus_musculus 0 431
ENSMUST00000132800 Pstpip1-006 retained_intron Mus_musculus 0 374

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