C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mex-3 RNA binding family member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558133 MEX3B-002 ENSG00000183496 9606 - 15:82041787-82046119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyOvaryPlacentaENST00000558133
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Ovary Placenta
ENST00000558133 0.164±0.00 0.235±0.00 0.160±0.07 0.282±0.00 0.071±0.00 0.138±0.00 0.252±0.17 0.168±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071F CIL_00071F_0002 CGP 15:81331217-82046141
CIL_0008DT CIL_0008DT_0001 VISTA 15:81587611-82189547
CIL_0000Y4 CIL_0000Y4_0002 CGP 15:82041778-82262763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 ISS calcium ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 ISS protein phosphorylation
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding
GO:0046777 ISS protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082237 Mex3b-201 protein_coding Mus_musculus 0 3515
ENSDART00000101537 mex3b-201 protein_coding Danio_rerio 0 527
ENSMUST00000062946 Mex3d-201 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000105350 Mex3d-001 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000123141 Mex3d-002 protein_coding Mus_musculus 0.0000000002 73

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