C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558555 MEIS3-005 ENSG00000105419 9606 - 19:47403172-47419269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000558555
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000558555 4.305±0.00 4.513±0.00 0.753±0.00 3.634±0.00 0.058±0.00 2.032±0.00 0.240±0.00 7.467±1.56 6.749±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002495 Meis3-001 protein_coding Mus_musculus 0 1349
ENSMUST00000177156 Meis3-005 nonsense_mediated_decay Mus_musculus 0 1271
ENSMUST00000175946 Meis3-004 retained_intron Mus_musculus 0 911
ENSMUST00000176506 Meis3-002 protein_coding Mus_musculus 0 800
ENSMUST00000176446 Meis3-009 nonsense_mediated_decay Mus_musculus 0 241

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