C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 14kDa (homologous Alu RNA binding protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558720 SRP14-005 ENSG00000140319 9606 - 15:40036042-40039050 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000558720
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000558720 29.560±0.00 37.139±0.00 42.446±0.00 33.973±0.00 19.736±0.00 18.493±0.00 32.115±0.00 54.485±0.00 30.616±0.00 219.236±186.75 210.299±217.13 239.839±168.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0001 VISTA 15:39791359-40393937
CIL_0006QZ CIL_0006QZ_0001 CGP 15:39934146-40039188
CIL_0006QY CIL_0006QY_0001 CGP 15:40035739-40108892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006614 IEA SRP-dependent cotranslational protein targeting to membrane
GO:0008312 IEA 7S RNA binding
GO:0048500 IEA signal recognition particle

Homologs

No Homologs available.

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