C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isocitrate dehydrogenase 2 (NADP+), mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559482 IDH2-002 ENSG00000182054 9606 - 15:90084014-90102477 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungOvaryENST00000559482
Transcript ID Bladder Lung Ovary
ENST00000559482 3.775±0.00 0.997±0.00 2.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T4 CIL_0001T4_0002 CGP 15:90001392-90102504
CIL_00079J CIL_00079J_0001 CGP 15:90083045-90229679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004450 IEA isocitrate dehydrogenase (NADP+) activity
GO:0006102 IEA isocitrate metabolic process
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107384 Idh2-001 protein_coding Mus_musculus 0 817
ENSMUST00000134328 Idh2-002 nonsense_mediated_decay Mus_musculus 0 662
ENSMUST00000139178 Idh2-005 retained_intron Mus_musculus 0 477
ENSMUST00000125542 Idh2-003 processed_transcript Mus_musculus 0 200
ENSMUST00000156761 Idh2-006 retained_intron Mus_musculus 4e-33 147

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