C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182054-ENSG00000185033 CGP 9606 15:90083045-90229679
GeneTranscriptPositionBiotype
ENSG00000182054 (IDH2)
isocitrate dehydrogenase 2 (NADP+), mitochondrial 		ENST00000330062 (IDH2-001) 90083045-90102504 protein_coding
ENST00000540499 (IDH2-004) 90084177-90100695 protein_coding
ENST00000559482 (IDH2-002) 90084014-90102477 protein_coding
ENST00000560061 (IDH2-003) 90083996-90102468 nonsense_mediated_decay
ENSG00000185033 (SEMA4B)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 		ENST00000332496 (SEMA4B-002) 90184963-90229670 protein_coding
ENST00000411539 (SEMA4B-001) 90201319-90229676 protein_coding
ENST00000558051 (SEMA4B-014) 90201536-90221392 processed_transcript
ENST00000558065 (SEMA4B-004) 90219208-90229679 retained_intron
ENST00000558848 (SEMA4B-012) 90217617-90220218 retained_intron
ENST00000558895 (SEMA4B-007) 90190344-90217554 protein_coding
ENST00000558975 (SEMA4B-015) 90221618-90223792 retained_intron
ENST00000559074 (SEMA4B-005) 90221750-90229660 protein_coding
ENST00000559247 (SEMA4B-019) 90225324-90228407 protein_coding
ENST00000559300 (SEMA4B-011) 90184918-90219843 nonsense_mediated_decay
ENST00000559322 (SEMA4B-006) 90160604-90217786 protein_coding
ENST00000559792 (SEMA4B-009) 90191928-90217810 protein_coding
ENST00000559983 (SEMA4B-017) 90225072-90228155 protein_coding
ENST00000560003 (SEMA4B-013) 90217056-90217785 retained_intron
ENST00000560089 (SEMA4B-003) 90201421-90228747 nonsense_mediated_decay
ENST00000560263 (SEMA4B-008) 90191922-90193563 processed_transcript
ENST00000560993 (SEMA4B-016) 90223877-90225674 retained_intron
ENST00000561085 (SEMA4B-010) 90184920-90221075 protein_coding
ENST00000561252 (SEMA4B-018) 90225002-90225608 retained_intron
ENST00000561321 (SEMA4B-020) 90227239-90228062 retained_intron
ENSG00000225193 (RPS12P26)
ribosomal protein S12 pseudogene 26 		ENST00000492017 (RPS12P26-001) 90206572-90206967 transcribed_processed_pseudogene
ENSG00000240470 (RN7SL346P)
RNA, 7SL, cytoplasmic 346, pseudogene 		ENST00000491561 (RN7SL346P-201) 90166233-90166526 misc_RNA
ENSG00000259685 (CTD-2315E11.1)
 ENST00000561101 (CTD-2315E11.1-001) 90102649-90133445 lincRNA
CIL_00079J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030541-ENSMUSG00000030539 CGP 10090 7:80094846-80226394
GeneTranscriptPositionBiotype
ENSMUSG00000030539 (Sema4b)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 		ENSMUST00000032754 (Sema4b-001) 80186841-80226394 protein_coding
ENSMUST00000107383 (Sema4b-002) 80186841-80221832 protein_coding
ENSMUST00000123023 (Sema4b-003) 80198538-80214065 retained_intron
ENSMUSG00000030541 (Idh2)
isocitrate dehydrogenase 2 (NADP+), mitochondrial 		ENSMUST00000107384 (Idh2-001) 80094846-80115392 protein_coding
ENSMUST00000125542 (Idh2-003) 80096028-80100881 processed_transcript
ENSMUST00000134070 (Idh2-004) 80098166-80099139 retained_intron
ENSMUST00000134328 (Idh2-002) 80094850-80115332 nonsense_mediated_decay
ENSMUST00000139178 (Idh2-005) 80095029-80098409 retained_intron
ENSMUST00000156761 (Idh2-006) 80095043-80096029 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079J_0001ENSG00000182054ENST00000330062ENST00000540499ENST00000559482ENST00000560061ENSG00000185033ENST00000332496ENST00000411539ENST00000558051ENST00000558065ENST00000558848ENST00000558895ENST00000558975ENST00000559074ENST00000559247ENST00000559300ENST00000559322ENST00000559792ENST00000559983ENST00000560003ENST00000560089ENST00000560263ENST00000560993ENST00000561085ENST00000561252ENST00000561321ENSG00000225193ENST00000492017ENSG00000240470ENST00000491561ENSG00000259685ENST00000561101CIL_00079J_0002ENSMUSG00000030539ENSMUST00000032754ENSMUST00000107383ENSMUST00000123023ENSMUSG00000030541ENSMUST00000107384ENSMUST00000125542ENSMUST00000134070ENSMUST00000134328ENSMUST00000139178ENSMUST00000156761
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079J_0001ENSG00000182054ENST00000330062ENST00000540499ENST00000559482ENST00000560061ENSG00000185033ENST00000332496ENST00000411539ENST00000558051ENST00000558065ENST00000558895ENST00000559074ENST00000560089ENST00000561085ENST00000561321ENSG00000225193ENST00000492017ENSG00000240470ENST00000491561ENSG00000259685ENST00000561101CIL_00079J_0002ENSMUSG00000030539ENSMUST00000032754ENSMUST00000107383ENSMUSG00000030541ENSMUST00000107384ENSMUST00000134070ENSMUST00000139178ENSMUST00000156761
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182054 ENST00000330062 1.632±0.00 5.806±0.00 6.554±0.00 9.766±5.51 6.293±2.01 4.117±0.93 30.627±18.47 15.736±10.41 15.350±10.58 2.277±1.60 32.577±0.00 4.250±0.92 22.951±4.11 2.559±0.00
ENST00000540499 7.979±0.00 12.065±0.00 5.243±0.00 19.748±16.58 12.642±7.39 17.153±5.46 89.535±61.71 79.380±0.00 102.442±0.00 16.607±0.00 138.559±88.92 19.911±19.28 65.422±13.65 7.489±5.08
ENST00000559482 N/A N/A 3.775±0.00 N/A N/A N/A N/A N/A N/A 0.997±0.00 N/A 2.145±0.00 N/A N/A
ENST00000560061 9.200±0.00 23.753±0.00 4.135±0.00 8.770±0.00 15.004±12.61 18.980±8.49 75.157±51.95 61.226±0.00 65.112±59.09 16.325±0.00 138.448±42.82 18.052±15.02 50.041±2.33 7.890±5.22
ENSG00000185033 ENST00000332496 3.682±0.00 8.090±0.00 N/A 5.501±5.34 3.380±2.06 6.728±5.24 4.529±0.00 12.589±11.02 5.579±4.82 23.745±0.00 0.402±0.00 12.012±13.94 14.828±5.02 9.104±0.00
ENST00000411539 0.976±0.00 N/A N/A 0.225±0.00 N/A N/A 1.666±0.00 1.066±0.00 0.736±0.00 N/A N/A 4.049±0.00 5.354±2.93 1.274±0.00
ENST00000558051 N/A N/A 2.381±0.00 1.147±0.00 7.198±0.00 N/A N/A 5.412±0.00 4.298±0.00 N/A N/A 4.800±0.00 N/A N/A
ENST00000558065 N/A N/A 0.332±0.00 N/A N/A 0.360±0.00 N/A N/A N/A 3.414±2.99 N/A N/A N/A 0.913±0.00
ENST00000558848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558895 N/A N/A N/A N/A N/A 7.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559074 N/A N/A N/A N/A N/A 5.790±0.00 N/A N/A 4.541±0.00 N/A 0.541±0.00 5.539±0.00 6.437±0.02 4.508±0.00
ENST00000559247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560089 N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561085 N/A N/A N/A 0.965±0.00 N/A N/A N/A N/A 3.315±0.00 2.154±0.00 N/A N/A N/A N/A
ENST00000561252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.202±0.00 N/A N/A
ENSG00000225193 ENST00000492017 0.076±0.00 0.544±0.00 1.848±0.00 0.702±0.15 2.043±1.92 1.020±0.80 0.484±0.41 0.508±0.19 0.134±0.06 0.938±0.75 0.424±0.00 0.790±0.52 0.073±0.00 0.213±0.00
ENSG00000240470 ENST00000491561 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00
ENSG00000259685 ENST00000561101 0.317±0.00 N/A N/A 0.953±0.00 0.293±0.00 0.592±0.00 N/A 0.142±0.00 0.367±0.00 0.583±0.00 N/A 0.505±0.29 N/A 0.188±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030539 ENSMUST00000032754 8.235±1.64 27.546±1.14 7.479±0.23 5.043±1.69 14.121±4.20 30.313±2.02 4.080±0.36 9.461±2.01 2.907±1.83 7.202±0.42 0.476±0.13 22.328±6.75 12.691±11.53 1.700±0.83
ENSMUST00000107383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
ENSMUST00000123023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030541 ENSMUST00000107384 63.644±11.64 66.699±15.31 32.243±1.08 42.673±21.22 47.305±10.10 62.194±4.46 536.074±59.84 239.373±36.89 81.108±21.56 52.141±16.34 138.020±36.45 74.489±17.68 93.237±32.83 3.089±1.05
ENSMUST00000125542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134070 N/A N/A N/A 21.461±3.30 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139178 N/A N/A N/A 17.569±5.37 N/A N/A N/A N/A N/A 14.849±0.00 N/A 26.995±2.10 20.023±2.63 0.910±0.25
ENSMUST00000156761 N/A N/A N/A 37.995±0.00 N/A N/A N/A N/A N/A N/A N/A 108.972±0.00 143.755±46.38 6.615±0.00

Loading